EAQAN operates through National Chapters in each member state to localize efforts and strengthen country-level quality assurance coordination.
- Kenya Universities Quality Assurance Network (KuQAN)
- Rwanda Higher Education Quality Assurance Network (RWAQAN)
- Tanzanian Universities Quality Assurance Forum (TUQAF)
- Uganda Universities Quality Assurance Forum (UUQAF)
- Forum Burundais d’Assurance Qualité (FOBAQ)
- Somali Universities Quality Assurance Network (SUQAN)